B0V8G6

PR
Gene name
smpB
Protein name
SsrA-binding protein
Names
Small protein B
Species
Acinetobacter baumannii (strain AYE)
KEGG Pathway
aby:ABAYE2970
EC number
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

1-45 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for B0V8G6

Entry ID Method Resolution Chain Position Source
AF-B0V8G6-F1 Predicted AlphaFoldDB

No variants for B0V8G6

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for B0V8G6

No associated diseases with B0V8G6

7 regional properties for B0V8G6

Type Name Position InterPro Accession
domain FERM domain 32 - 312 IPR000299
domain FERM adjacent 322 - 368 IPR014847
domain FERM, N-terminal 36 - 98 IPR018979
domain FERM, C-terminal PH-like domain 229 - 316 IPR018980
conserved_site FERM conserved site 86 - 115 IPR019747
domain FERM central domain 116 - 225 IPR019748
domain Band 4.1 domain 28 - 225 IPR019749

Functions

Description
EC Number
Subcellular Localization
  • Cytoplasm
  • The tmRNA-SmpB complex associates with stalled 70S ribosomes
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

1 GO annotations of cellular component

Name Definition
cytoplasm The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

1 GO annotations of molecular function

Name Definition
RNA binding Binding to an RNA molecule or a portion thereof.

1 GO annotations of biological process

Name Definition
trans-translation A translational elongation process in which transfer of a translating ribosome from one mRNA to another RNA template takes place. Trans-translation occurs during tmRNA release of stalled ribosomes.

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MAKATVVKKH NGGTIAQNKR ARHDYFIEEK FEAGMSLLGW EVKSLRAGRM SLTESYVIFK
70 80 90 100 110 120
NGEAFLFGAQ IQPLLSASTH IVPEATRTRK LLLSRRELEK LMGAVNQKGY SCVPLACYWK
130 140 150
GHLVKLEIAL VKGKQLHDKR ATEKERDWQR DKARIFHK