A9N5C4
Gene name |
rhmA |
Protein name |
2-keto-3-deoxy-L-rhamnonate aldolase |
Names |
KDR aldolase, 2-dehydro-3-deoxyrhamnonate aldolase |
Species |
Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) |
KEGG Pathway |
spq:SPAB_00694 |
EC number |
4.1.2.53: Aldehyde-lyases |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for A9N5C4
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-A9N5C4-F1 | Predicted | AlphaFoldDB |
No variants for A9N5C4
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for A9N5C4 | |||||
No associated diseases with A9N5C4
5 regional properties for A9N5C4
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| conserved_site | ATP-dependent RNA helicase DEAD-box, conserved site | 163 - 171 | IPR000629 |
| domain | Helicase, C-terminal | 242 - 390 | IPR001650 |
| domain | DEAD/DEAH box helicase domain | 33 - 207 | IPR011545 |
| domain | Helicase superfamily 1/2, ATP-binding domain | 28 - 234 | IPR014001 |
| domain | RNA helicase, DEAD-box type, Q motif | 9 - 37 | IPR014014 |
Functions
| Description | ||
|---|---|---|
| EC Number | 4.1.2.53 | Aldehyde-lyases |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
No GO annotations of cellular component
| Name | Definition |
|---|---|
| No GO annotations for cellular component |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| 2-keto-3-deoxy-L-rhamnonate aldolase activity | Catalysis of the reaction 2-dehydro-3-deoxy-L-rhamnonate = pyruvate + (S)-lactaldehyde. |
| magnesium ion binding | Binding to a magnesium (Mg) ion. |
No GO annotations of biological process
| Name | Definition |
|---|---|
| No GO annotations for biological process |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MNALLSNPFK | EGLRKGDTQI | GLWLSSTTSY | MAEIAATSGY | DWLLIDGEHA | PNTVQDLYHQ |
| 70 | 80 | 90 | 100 | 110 | 120 |
| LQAIAPYASQ | PVIRPIEGSK | ALIKQVLDIG | AQTLLIPMVD | TAEQARQVVS | ATRYPPLGQR |
| 130 | 140 | 150 | 160 | 170 | 180 |
| GVGASVARAA | RWGRIDNYMA | QANESLCLLV | QVESKVALEN | LDAILEVEGI | DGVFIGPADL |
| 190 | 200 | 210 | 220 | 230 | 240 |
| SASLGYPDNA | GHPEVQRIIE | SCIYRIRAAG | KAAGFLAVDP | AMAQKCLAWG | ANFVAVGVDT |
| 250 | 260 | ||||
| MLYTEALDSR | LAMFKSVQSV | STAKRSY |