A6SFW7

PR
Gene name
dbp2 (BC1G_11725)
Protein name
ATP-dependent RNA helicase dbp2
Names
Species
Botryotinia fuckeliana (strain B05.10) (Noble rot fungus) (Botrytis cinerea)
KEGG Pathway
EC number
3.6.4.13: Acting on ATP; involved in cellular and subcellular movement
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

454-514 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for A6SFW7

Entry ID Method Resolution Chain Position Source
AF-A6SFW7-F1 Predicted AlphaFoldDB

No variants for A6SFW7

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for A6SFW7

No associated diseases with A6SFW7

5 regional properties for A6SFW7

Type Name Position InterPro Accession
conserved_site ATP-dependent RNA helicase DEAD-box, conserved site 254 - 262 IPR000629
domain Helicase, C-terminal 336 - 483 IPR001650
domain DEAD/DEAH box helicase domain 126 - 296 IPR011545
domain Helicase superfamily 1/2, ATP-binding domain 121 - 324 IPR014001
domain RNA helicase, DEAD-box type, Q motif 102 - 130 IPR014014

Functions

Description
EC Number 3.6.4.13 Acting on ATP; involved in cellular and subcellular movement
Subcellular Localization
  • Cytoplasm
  • Nucleus
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

2 GO annotations of cellular component

Name Definition
cytoplasm The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

4 GO annotations of molecular function

Name Definition
ATP binding Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
ATP hydrolysis activity Catalysis of the reaction: ATP + H2O = ADP + H+ phosphate. ATP hydrolysis is used in some reactions as an energy source, for example to catalyze a reaction or drive transport against a concentration gradient.
RNA binding Binding to an RNA molecule or a portion thereof.
RNA helicase activity Unwinding of an RNA helix, driven by ATP hydrolysis.

2 GO annotations of biological process

Name Definition
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins.
rRNA processing Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules.

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MLTISTGGGG GGGNVNGYSG GGGGGYGGGG GYGGGGAGGD RMNNLGANLQ KQNWDLSTMP
70 80 90 100 110 120
KFEKSFYKED PVVAARSEED VAKFRAQHNI AVQGPNIPKP VETFDEAGFP AYVMTEVKAQ
130 140 150 160 170 180
GFPAPTPIQS QGWPMALSGR DVVGIAETGS GKTLTYCLPA IVHINAQPLL APGDGPIVLV
190 200 210 220 230 240
LAPTRELAVQ IQQEITKFGK SSRIRNTCVY GGVPKGGQIR DLAKGVEVCI ATPGRLIDMI
250 260 270 280 290 300
ESGKTNLRRV TYLVLDEADR MLDMGFEPQI RKILGQIRPD RQTCMWSATW PKEVRALASD
310 320 330 340 350 360
YLNEFIQVNI GSLELSANHR ITQIVEVVSE FEKRDKMTKH LEKIMEDKDN KILIFTGTKR
370 380 390 400 410 420
VADDITRFLR QDGWPALSIH GDKQQNERDW VLNEFKTGKS PIMVATDVAS RGIDVRNITH
430 440 450 460 470 480
VFNYDYPNNS EDYIHRIGRT GRAGQKGTAI TLFTTDNQKQ ARDLVNVLTE AKQVIDPRLA
490 500 510
EMTRYGGGGG GRGYGGRGYG GGRGRGGGGG GRRW