A6QDC3
Gene name |
deoB |
Protein name |
Phosphopentomutase |
Names |
Phosphodeoxyribomutase |
Species |
Staphylococcus aureus (strain Newman) |
KEGG Pathway |
sae:NWMN_0083 |
EC number |
5.4.2.7: Phosphotransferases (phosphomutases) |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for A6QDC3
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-A6QDC3-F1 | Predicted | AlphaFoldDB |
No variants for A6QDC3
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for A6QDC3 | |||||
No associated diseases with A6QDC3
1 regional properties for A6QDC3
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Metalloenzyme | 7 - 378 | IPR006124 |
Functions
| Description | ||
|---|---|---|
| EC Number | 5.4.2.7 | Phosphotransferases (phosphomutases) |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
3 GO annotations of molecular function
| Name | Definition |
|---|---|
| magnesium ion binding | Binding to a magnesium (Mg) ion. |
| manganese ion binding | Binding to a manganese ion (Mn). |
| phosphopentomutase activity | Catalysis of the reaction: D-ribose 1-phosphate = D-ribose 5-phosphate. |
3 GO annotations of biological process
| Name | Definition |
|---|---|
| 5-phosphoribose 1-diphosphate biosynthetic process | The chemical reactions and pathways resulting in the formation of 5-phosphoribose 1-diphosphate, also known as 5-phosphoribosyl-1-pyrophosphate. |
| cellular metabolic compound salvage | Any process which produces a useful metabolic compound from derivatives of it without de novo synthesis, as carried out by individual cells. |
| deoxyribonucleotide catabolic process | The chemical reactions and pathways resulting in the breakdown of a deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a base linked to a deoxyribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MTRPFNRVHL | IVMDSVGIGE | APDAADFKDE | GSHTLRHTLE | GFDQTLPNLE | KLGLGNIDKL |
| 70 | 80 | 90 | 100 | 110 | 120 |
| PVVNAVEQPE | AYYTKLSEAS | VGKDTMTGHW | EIMGLNIMQP | FKVYPNGFPE | ELIQQIEEMT |
| 130 | 140 | 150 | 160 | 170 | 180 |
| GRKVVANKPA | SGTQIIDEWG | EHQMKTGDLI | VYTSADPVLQ | IAAHEDIIPL | EELYDICEKV |
| 190 | 200 | 210 | 220 | 230 | 240 |
| RELTKDPKYL | IGRIIARPYV | GEPGNFTRTS | NRHDYALKPF | GKTVLDHLKD | GGYDVIAIGK |
| 250 | 260 | 270 | 280 | 290 | 300 |
| INDIYDGEGV | TEAVRTKSNM | DGMDQLMKIV | KKDFTGISFL | NLVDFDALYG | HRRDKPGYAQ |
| 310 | 320 | 330 | 340 | 350 | 360 |
| AIKDFDDRLP | ELFSNLKEDD | LVIITADHGN | DPTAPGTDHT | REYIPVIMYS | PKFKGGHALE |
| 370 | 380 | 390 | |||
| SDTTFSSIGA | TIADNFNVTL | PEFGKSYLKE | LK |