A5WBW9

PR
Gene name
rimM
Protein name
Ribosome maturation factor RimM
Names
Species
Psychrobacter sp (strain PRwf-1)
KEGG Pathway
prw:PsycPRwf_0201
EC number
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

56-176 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for A5WBW9

Entry ID Method Resolution Chain Position Source
AF-A5WBW9-F1 Predicted AlphaFoldDB

No variants for A5WBW9

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for A5WBW9

No associated diseases with A5WBW9

2 regional properties for A5WBW9

Type Name Position InterPro Accession
domain RimM, N-terminal 12 - 92 IPR002676
domain PRC-barrel domain 99 - 171 IPR027275

Functions

Description
EC Number
Subcellular Localization
  • Cytoplasm
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

2 GO annotations of cellular component

Name Definition
cytoplasm The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
ribosome An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

1 GO annotations of molecular function

Name Definition
ribosome binding Binding to a ribosome.

2 GO annotations of biological process

Name Definition
ribosomal small subunit biogenesis A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a small ribosomal subunit; includes transport to the sites of protein synthesis.
rRNA processing Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules.

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MTKPNADSLM KIGQLKKPYG IKGWLWVFSE TEEREAIFSY SPWWMKTATG FKPLTVTQWR
70 80 90 100 110 120
RQGTGIVAQF EQVPDRNVAE TMNGVSIWID KDSLPSTEED EYYWSDLVGL SVINKQDECL
130 140 150 160 170
GTVKELFETG AHPIMKVVPS QDSIDDEPRM IPWHKQTVDV VDLAAGRMVV DWERDF