A5DQF1
Gene name |
RRP3 (PGUG_05502) |
Protein name |
ATP-dependent rRNA helicase RRP3 |
Names |
|
Species |
Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) (Yeast) (Candida guilliermondii) |
KEGG Pathway |
pgu:PGUG_05502 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for A5DQF1
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-A5DQF1-F1 | Predicted | AlphaFoldDB |
No variants for A5DQF1
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for A5DQF1 | |||||
No associated diseases with A5DQF1
6 regional properties for A5DQF1
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| conserved_site | ATP-dependent RNA helicase DEAD-box, conserved site | 212 - 220 | IPR000629 |
| domain | Helicase, C-terminal | 291 - 437 | IPR001650 |
| domain | DEAD/DEAH box helicase domain | 88 - 254 | IPR011545 |
| domain | Helicase superfamily 1/2, ATP-binding domain | 83 - 281 | IPR014001 |
| domain | RNA helicase, DEAD-box type, Q motif | 64 - 92 | IPR014014 |
| domain | DDX47/Rrp3, DEAD-box helicase domain | 65 - 267 | IPR044765 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
4 GO annotations of molecular function
| Name | Definition |
|---|---|
| ATP binding | Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
| hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. |
| RNA binding | Binding to an RNA molecule or a portion thereof. |
| RNA helicase activity | Unwinding of an RNA helix, driven by ATP hydrolysis. |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| rRNA processing | Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MALKPEKVKS | SKSASTVDAK | SLAEKIKKNA | LKQKKQAPVT | EKPEEIVETT | SEASQDVNSE |
| 70 | 80 | 90 | 100 | 110 | 120 |
| QQFHTFSELN | LVPELMEAIE | KLKYTKPTPI | QSGAIPHALE | GKDIIGLAQT | GSGKTAAFAI |
| 130 | 140 | 150 | 160 | 170 | 180 |
| PILQSLWEAQ | RPYYALVLAP | TRELAYQIKE | TFDALGSGMG | VRSVCIVGGM | DMMDQARDLM |
| 190 | 200 | 210 | 220 | 230 | 240 |
| RKPHILVATP | GRIMDHLENT | KGFSLKSLQY | LVMDEADRLL | DMDFGPALDK | ILKVIPTKRT |
| 250 | 260 | 270 | 280 | 290 | 300 |
| TYLFSATMTN | KIAKLQRASL | HEPVKVAVSN | KYQTADNLVQ | SMMLVSDGYK | NTFLIHLLNE |
| 310 | 320 | 330 | 340 | 350 | 360 |
| FMGKSIIVFT | RTCAHTQRST | LLARILGFSA | VPLHGQLTQS | QRLGSLNKFK | SGKANILIAT |
| 370 | 380 | 390 | 400 | 410 | 420 |
| DVAARGLDIP | SVDVVINYDI | PTDSKAYIHR | VGRTARAGKS | GKSISLVTQY | DLEMYLRIES |
| 430 | 440 | 450 | 460 | 470 | |
| VLGFKLPKDP | SPPRDVLNAL | HVHVDRASAE | AIKQTKDFHE | KRTKKKRDDR | DREER |