A4XSC4

PR
Gene name
rnc
Protein name
Ribonuclease 3
Names
Ribonuclease III, RNase III
Species
Pseudomonas mendocina (strain ymp)
KEGG Pathway
pmy:Pmen_1475
EC number
3.1.26.3: Endoribonucleases producing 5'-phosphomonoesters
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

173-229 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for A4XSC4

Entry ID Method Resolution Chain Position Source
AF-A4XSC4-F1 Predicted AlphaFoldDB

No variants for A4XSC4

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for A4XSC4

No associated diseases with A4XSC4

2 regional properties for A4XSC4

Type Name Position InterPro Accession
domain Ribonuclease III domain 5 - 148 IPR000999
domain Double-stranded RNA-binding domain 154 - 224 IPR014720

Functions

Description
EC Number 3.1.26.3 Endoribonucleases producing 5'-phosphomonoesters
Subcellular Localization
  • Cytoplasm
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

1 GO annotations of cellular component

Name Definition
cytoplasm The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

3 GO annotations of molecular function

Name Definition
metal ion binding Binding to a metal ion.
ribonuclease III activity Catalysis of the endonucleolytic cleavage of RNA with 5'-phosphomonoesters and 3'-OH termini; makes two staggered cuts in both strands of dsRNA, leaving a 3' overhang of 2 nt.
rRNA binding Binding to a ribosomal RNA.

3 GO annotations of biological process

Name Definition
mRNA processing Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide.
rRNA processing Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules.
tRNA processing The process in which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group.

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MSPNLSRLER KLGHSFKDQD LMILALTHRS FAGRNNERLE FLGDAILNFV AGEALFERFP
70 80 90 100 110 120
QAREGQLSRL RARLVKGETL AVLARGFELG EYLRLGSGEL KSGGFRRESI LADALEALIG
130 140 150 160 170 180
AIYLDAGMDA ARERVLDWLS GELDGLTLID TNKDPKTRLQ EFLQSRACEL PRYEVVDIQG
190 200 210 220
EPHCRTFMVE CQVALLNEKT LGQGGSRRIA EQVAAAAALI ALGVENGND