A3LY29
Gene name |
PRT1 |
Protein name |
Eukaryotic translation initiation factor 3 subunit B |
Names |
eIF3b, Eukaryotic translation initiation factor 3 90 kDa subunit homolog, eIF3 p90, Translation initiation factor eIF3 p90 subunit homolog |
Species |
Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) (Yeast) (Pichia stipitis) |
KEGG Pathway |
pic:PICST_73391 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for A3LY29
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-A3LY29-F1 | Predicted | AlphaFoldDB |
No variants for A3LY29
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for A3LY29 | |||||
No associated diseases with A3LY29
3 GO annotations of cellular component
| Name | Definition |
|---|---|
| eukaryotic 43S preinitiation complex | A protein complex composed of the 40S ribosomal subunit plus eIF1A, eIF3, and eIF2-GTP-bound methionyl-initiator methionine tRNA. |
| eukaryotic 48S preinitiation complex | A protein complex composed of the small ribosomal subunit, eIF3, eIF1A, methionyl-initiatior methionine and a capped mRNA. The complex is initially positioned at the 5'-end of the capped mRNA. |
| eukaryotic translation initiation factor 3 complex | A complex of several polypeptides that plays at least two important roles in protein synthesis: First, eIF3 binds to the 40S ribosome and facilitates loading of the Met-tRNA/eIF2.GTP ternary complex to form the 43S preinitiation complex. Subsequently, eIF3 apparently assists eIF4 in recruiting mRNAs to the 43S complex. The eIF3 complex contains five conserved core subunits, and may contain several additional proteins; the non-core subunits are thought to mediate association of the complex with specific sets of mRNAs. |
3 GO annotations of molecular function
| Name | Definition |
|---|---|
| RNA binding | Binding to an RNA molecule or a portion thereof. |
| translation initiation factor activity | Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide. |
| translation initiation factor binding | Binding to a translation initiation factor, any polypeptide factor involved in the initiation of ribosome-mediated translation. |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| formation of cytoplasmic translation initiation complex | Joining of the large subunit, with release of IF2/eIF2 and IF3/eIF3. This leaves the functional ribosome at the AUG, with the methionyl/formyl-methionyl-tRNA positioned at the P site. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MSLTEAEYHE | LEKQVNLDDI | DFSDLEEQYE | VDVGLDNYVV | VDGAPIAPEA | KVPVLIKVLK |
| 70 | 80 | 90 | 100 | 110 | 120 |
| KLFNTVGKVV | EGDEGIYMPL | EDGKSKGYLF | VQFETSEMAE | AAIKQLHGKK | LDQKHRLLVN |
| 130 | 140 | 150 | 160 | 170 | 180 |
| RLSDIEKYGV | EGNVAAEFVE | PELPPFKSHG | YLKSWLQDPQ | GRDQIALHHS | ETFGVFWNKK |
| 190 | 200 | 210 | 220 | 230 | 240 |
| KSDPEPVFEP | RKFFTSKYAK | FSPKGTYLFS | IHPQGVQSWG | GADFSSIDKF | MHNQVRLVDF |
| 250 | 260 | 270 | 280 | 290 | 300 |
| SPNEKYMVTL | SPLPITAPDS | AAERAVFPFG | PESYGHKLVI | WDLTTGEPAR | TFALPPHLEG |
| 310 | 320 | 330 | 340 | 350 | 360 |
| QKEMPWPLVK | WSHDDKYCAR | QGPGALAVYE | TPSFQLLDKK | LIKIDDIVDF | EWAPAGVHLA |
| 370 | 380 | 390 | 400 | 410 | 420 |
| NNKSENGHHL | LSYWTPESSN | QTARVAVMQI | PTRQILRTVN | LFQVSDCKMH | WQSEGKLLCV |
| 430 | 440 | 450 | 460 | 470 | 480 |
| KVDRHTKSGK | TIFTNLEFFK | TTEKDIPVEK | LELKEIVINF | AWEPKSERFV | IISRLDDGNL |
| 490 | 500 | 510 | 520 | 530 | 540 |
| NSAIPKNIID | FYAPDVNGKG | KSATSVYKSY | KTITDKHSNT | VFWSPKGRYV | VVATISRSNG |
| 550 | 560 | 570 | 580 | 590 | 600 |
| EIEFFDVSFD | DSNKNAPANV | KLLKNDKFSG | MTNISWDPSG | RFVATWSSSW | LHTIENGYKL |
| 610 | 620 | 630 | 640 | 650 | 660 |
| YEFTGNLLRD | DSIDQFKEFI | WRPRPASLLN | SADRKKVRAN | LREYSAQFEE | SDAMEADAAL |
| 670 | 680 | 690 | 700 | 710 | |
| RELIYARRRA | LEDWKAYRAK | HASKAVKANE | VQAEIIEEIK | EEIIEEKEEI | VE |