A3LV40

PR
Gene name
DBP9 (PICST_84074)
Protein name
ATP-dependent RNA helicase DBP9
Names
Species
Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) (Yeast) (Pichia stipitis)
KEGG Pathway
pic:PICST_84074
EC number
3.6.4.13: Acting on ATP; involved in cellular and subcellular movement
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

1-45 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for A3LV40

Entry ID Method Resolution Chain Position Source
AF-A3LV40-F1 Predicted AlphaFoldDB

No variants for A3LV40

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for A3LV40

No associated diseases with A3LV40

4 regional properties for A3LV40

Type Name Position InterPro Accession
domain Helicase, C-terminal 257 - 461 IPR001650
domain DEAD/DEAH box helicase domain 39 - 219 IPR011545
domain Helicase superfamily 1/2, ATP-binding domain 34 - 247 IPR014001
domain RNA helicase, DEAD-box type, Q motif 15 - 43 IPR014014

Functions

Description
EC Number 3.6.4.13 Acting on ATP; involved in cellular and subcellular movement
Subcellular Localization
  • Nucleus, nucleolus
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

1 GO annotations of cellular component

Name Definition
nucleolus A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.

4 GO annotations of molecular function

Name Definition
ATP binding Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
ATP hydrolysis activity Catalysis of the reaction: ATP + H2O = ADP + H+ phosphate. ATP hydrolysis is used in some reactions as an energy source, for example to catalyze a reaction or drive transport against a concentration gradient.
RNA binding Binding to an RNA molecule or a portion thereof.
RNA helicase activity Unwinding of an RNA helix, driven by ATP hydrolysis.

1 GO annotations of biological process

Name Definition
rRNA processing Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules.

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MSTTSASEAY VDDNSSWDSF HLDARLVQAI DQLGFEHPTL IQASAIPLAL EEKRDIIAKA
70 80 90 100 110 120
STGSGKTGAY VIPIIHNLLT DAEVESGNHH IKSIILVPTR ELSNQVLQFV EKLLVYSNNR
130 140 150 160 170 180
INAINLSANL SDQVVNSLLM NKPEIIISTP AKLIQVLEKN ANKDLIDLST VRNLTIDEVD
190 200 210 220 230 240
LVLSYGYLED LQKLETYLPI KKNLQTFLMS ATVNDDLNDL KTRFCSRPAI LKLNDEESAQ
250 260 270 280 290 300
NKLIQYYART TEFDKFLLAY VIFKLNLIKG KTLVFVNNID RGYRLKLFLE QFGIRCCILN
310 320 330 340 350 360
SELPINSRLH IVEEYNKNVY NLLIATDETN DFTVEKDEQQ QEESQDKKAS SAKTKQSKKS
370 380 390 400 410 420
KKQKKDTEYG VSRGVDFRNV ACVLNFDLPT TSKAYIHRIG RTARAGKAGM ALSFVLPIKE
430 440 450 460 470 480
VGKHKTASLS TAKKDEKILR RIVKQQSKNG FEIKPYQFDM KQVEGFRYRS EDAFRAVTQT
490 500 510 520 530 540
AIREARIKEL KNELINSDKL KRFFEENPQD LASLRHDKEL HPTRVQSHLK RVPDYLLPES
550 560 570 580
ARQDPKKIGF VPFHKNKVHK NRKKKPTGRK ADPLKSFKNR K