A3GHP2

PR
Gene name
GAR1 (PICST_75322)
Protein name
H/ACA ribonucleoprotein complex subunit GAR1
Names
snoRNP protein GAR1
Species
Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) (Yeast) (Pichia stipitis)
KEGG Pathway
pic:PICST_75322
EC number
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

1-50 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for A3GHP2

Entry ID Method Resolution Chain Position Source
AF-A3GHP2-F1 Predicted AlphaFoldDB

No variants for A3GHP2

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for A3GHP2

No associated diseases with A3GHP2

No regional properties for A3GHP2

Type Name Position InterPro Accession
No domain, repeats, and functional sites for A3GHP2

Functions

Description
EC Number
Subcellular Localization
  • Nucleus, nucleolus
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

2 GO annotations of cellular component

Name Definition
nucleolus A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
ribonucleoprotein complex A macromolecular complex that contains both RNA and protein molecules.

1 GO annotations of molecular function

Name Definition
RNA binding Binding to an RNA molecule or a portion thereof.

2 GO annotations of biological process

Name Definition
pseudouridine synthesis The intramolecular conversion of uridine to pseudouridine within an RNA molecule. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs.
rRNA processing Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules.

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MNRGRGGFRG GRGGRTGPSQ FQQGPPDTVL EMGAFMQACE GDIVCRSINV KIPYFNAPIY
70 80 90 100 110 120
LENKTQIGKV DEILGPLNEV FFTIKPSEGV KADSFKEGDK FFIGPDKLLP LERFLPKPKE
130 140 150 160 170 180
VGPKPKRKSG GAGGASRGGF GGRGGARGGF GGRGGARGGF GGRGGSRGGF SGGRGGSRGG
190 200
FGGRGGSRGG FGGSRGGRGG RF