A1A4Y4
Gene name |
IRGM (IFI1, IRGM1, LRG47) |
Protein name |
Immunity-related GTPase family M protein |
Names |
Immunity-related GTPase family M protein 1, Interferon-inducible protein 1, LPS-stimulated RAW 264.7 macrophage protein 47 homolog, LRG-47 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:345611 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for A1A4Y4
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-A1A4Y4-F1 | Predicted | AlphaFoldDB |
170 variants for A1A4Y4
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs1322402828 CA361784797 |
2 | E>* | No |
ClinGen gnomAD |
|
|
CA361784795 rs1322402828 |
2 | E>K | No |
ClinGen gnomAD |
|
|
rs763474099 CA129176681 |
3 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs749790081 CA3515024 |
3 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA361784810 rs1336743456 |
4 | M>T | No |
ClinGen gnomAD |
|
|
CA129176685 rs1040621750 |
4 | M>V | No |
ClinGen Ensembl |
|
|
rs1193048835 CA361784817 |
5 | N>H | No |
ClinGen TOPMed gnomAD |
|
|
CA361784833 rs1561738640 |
7 | E>G | No |
ClinGen Ensembl |
|
|
CA361784841 rs1407543289 |
8 | K>R | No |
ClinGen gnomAD |
|
|
rs757815291 CA3515025 |
9 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1020331668 CA129176700 |
11 | A>E | No |
ClinGen gnomAD |
|
|
CA3515027 VAR_039899 CA361784902 rs180802994 |
17 | E>D | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD UniProt dbSNP |
|
|
rs1189533418 CA361784900 |
17 | E>G | No |
ClinGen gnomAD |
|
|
CA361784903 rs1457946148 |
18 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1159661553 CA361784920 |
20 | S>C | No |
ClinGen gnomAD |
|
|
CA361784924 rs1390516945 |
21 | N>D | No |
ClinGen TOPMed gnomAD |
|
|
rs1390516945 CA361784923 |
21 | N>Y | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 22 | I>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1034089597 CA129176719 |
22 | I>V | No |
ClinGen gnomAD |
|
|
CA361784939 rs1322491414 |
23 | K>R | No |
ClinGen TOPMed |
|
| TCGA novel | 24 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1317484762 CA361784948 |
24 | E>G | No |
ClinGen gnomAD |
|
|
CA361784944 rs1378941541 |
24 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1438074567 CA361784954 |
25 | T>P | No |
ClinGen gnomAD |
|
|
CA361784961 rs1228567208 |
26 | L>P | No |
ClinGen gnomAD |
|
|
rs139363001 CA129176726 |
27 | K>N | No |
ClinGen 1000Genomes |
|
|
CA361784976 rs1327432426 |
28 | I>M | No |
ClinGen gnomAD |
|
|
rs1290629133 CA361784974 |
28 | I>T | No |
ClinGen gnomAD |
|
|
rs994846114 CA129176757 |
33 | P>A | No |
ClinGen TOPMed |
|
|
rs994846114 CA129176753 |
33 | P>T | No |
ClinGen TOPMed |
|
|
CA361785006 rs1377693714 |
34 | V>I | No |
ClinGen TOPMed |
|
| TCGA novel | 37 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA361785032 rs1268209168 |
37 | T>I | No |
ClinGen gnomAD |
|
|
CA361785034 rs1473059816 |
38 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
CA361785045 rs1184533557 |
39 | A>E | No |
ClinGen gnomAD |
|
|
CA361785058 rs1157782183 |
41 | D>G | No |
ClinGen gnomAD |
|
|
rs1561738748 CA361785056 |
41 | D>Y | No |
ClinGen Ensembl |
|
|
rs962229683 CA129176766 |
42 | S>A | No |
ClinGen Ensembl |
|
|
rs1581637754 CA361785079 |
44 | N>K | No |
ClinGen Ensembl |
|
|
CA361785077 rs1414501331 |
44 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
CA361785091 rs1189812480 |
46 | M>T | No |
ClinGen TOPMed |
|
|
CA129176770 rs1027625080 |
48 | T>A | No |
ClinGen Ensembl |
|
|
CA3515031 rs779184883 |
48 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361785104 rs779184883 |
48 | T>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3515032 rs187395700 |
51 | S>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA129176782 rs187395700 |
51 | S>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA129176788 rs187395700 |
51 | S>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1581637766 CA361785130 |
52 | A>G | No |
ClinGen Ensembl |
|
| TCGA novel | 53 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA3515033 rs762970800 |
54 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA129176804 COSM1595125 rs930645632 |
54 | R>Q | endometrium [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs1050494429 CA129176820 |
56 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1050494429 CA129176815 |
56 | T>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1299643610 CA361785156 |
57 | G>E | No |
ClinGen TOPMed |
|
|
rs528514907 CA129176830 |
58 | H>Q | No |
ClinGen Ensembl |
|
|
rs564391527 CA3515035 |
58 | H>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs759212417 CA3515036 |
59 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs181858503 CA3515037 |
60 | G>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1227064665 CA361785175 |
60 | G>D | No |
ClinGen gnomAD |
|
|
rs181858503 CA361785173 |
60 | G>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA361785185 rs1477282413 |
62 | A>T | No |
ClinGen gnomAD |
|
|
rs1263237930 CA361785188 |
62 | A>V | No |
ClinGen Ensembl |
|
|
rs1249976416 CA361785195 |
63 | S>* | No |
ClinGen TOPMed gnomAD |
|
|
CA361785196 rs1249976416 |
63 | S>L | No |
ClinGen TOPMed gnomAD |
|
|
CA361785192 rs1207370151 |
63 | S>P | No |
ClinGen gnomAD |
|
|
rs1010273904 CA361785201 |
64 | P>L | No |
ClinGen gnomAD |
|
|
rs1010273904 CA129176875 |
64 | P>R | No |
ClinGen gnomAD |
|
|
CA361785199 rs1437434829 |
64 | P>S | No |
ClinGen gnomAD |
|
|
CA361785207 rs1473752726 |
65 | P>L | No |
ClinGen gnomAD |
|
|
CA361785202 rs1237785008 |
65 | P>S | No |
ClinGen gnomAD |
|
|
CA129176897 rs913219331 |
66 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
CA361785243 rs551248565 |
71 | A>D | No |
ClinGen 1000Genomes gnomAD |
|
| TCGA novel | 71 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA129176902 rs551248565 |
71 | A>V | No |
ClinGen 1000Genomes gnomAD |
|
|
CA3515040 rs563186745 |
73 | Q>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1169723689 CA361785258 |
74 | R>G | No |
ClinGen TOPMed |
|
|
rs1290993470 CA361785264 |
74 | R>S | No |
ClinGen gnomAD |
|
|
rs1043976431 CA129176906 |
76 | A>V | No |
ClinGen gnomAD |
|
|
CA129176908 rs904216759 |
77 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
CA361785289 rs1451113614 |
78 | Y>* | No |
ClinGen gnomAD |
|
|
rs978814079 CA129176911 |
78 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1554126690 CA361785303 |
80 | S>F | No |
ClinGen Ensembl |
|
|
CA129176917 rs925151384 |
82 | H>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs1230759009 CA361785328 |
84 | S>* | No |
ClinGen gnomAD |
|
|
CA129176919 rs748507126 |
85 | N>D | No |
ClinGen Ensembl |
|
|
CA129176925 rs999847831 |
85 | N>S | No |
ClinGen Ensembl |
|
|
rs530731715 CA129176928 |
86 | V>M | No |
ClinGen 1000Genomes |
|
|
CA361785342 rs936462559 |
87 | V>L | No |
ClinGen TOPMed |
|
|
CA129176932 rs936462559 |
87 | V>M | No |
ClinGen TOPMed |
|
|
CA129176940 rs781556508 |
88 | L>V | No |
ClinGen Ensembl |
|
|
rs1275516308 CA361785358 |
89 | W>L | No |
ClinGen TOPMed |
|
|
CA361785364 rs1581637909 |
90 | D>A | No |
ClinGen Ensembl |
|
|
CA3515041 rs753392162 |
90 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA361785363 rs753392162 |
90 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1358694005 CA361785383 |
92 | P>L | No |
ClinGen TOPMed |
|
|
rs1325800218 CA361785379 |
92 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA361785401 rs72553867 |
94 | T>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
VAR_039900 CA3515042 rs72553867 |
94 | T>K | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA361785414 rs1449969231 |
96 | S>P | No |
ClinGen gnomAD |
|
|
CA3515044 rs750960300 |
97 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361785423 rs750960300 |
97 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1561738938 CA361785427 |
97 | A>V | No |
ClinGen Ensembl |
|
|
CA361785429 rs1561738941 |
98 | T>S | No |
ClinGen Ensembl |
|
|
CA129176962 rs1024182878 |
98 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1172742457 CA361785447 |
100 | T>A | No |
ClinGen gnomAD |
|
|
rs758635688 CA3515045 |
100 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 102 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1468633505 CA361785472 |
102 | E>G | No |
ClinGen gnomAD |
|
|
rs1199734968 CA361785466 |
102 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1336452787 CA361785487 |
103 | N>S | No |
ClinGen gnomAD |
|
|
rs972416559 CA129176974 |
104 | Y>* | No |
ClinGen gnomAD |
|
|
CA361785507 rs10065172 |
105 | L>M | Inflammatory bowel disease 19 (ibd19) [Ensembl] | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs747196011 CA3515046 |
105 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs769060814 CA3515047 |
108 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA129176982 rs1026652178 |
112 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs781399456 CA3515048 |
112 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA129176988 rs888198292 |
113 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1262253413 CA361785632 |
115 | F>L | No |
ClinGen gnomAD |
|
|
CA361785642 rs1473718690 |
116 | I>L | No |
ClinGen TOPMed |
|
|
rs1465308333 CA361785669 |
118 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1465308333 CA361785671 |
118 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1259073219 CA361785699 |
120 | S>F | No |
ClinGen gnomAD |
|
|
rs1425162166 CA361785711 |
122 | Q>* | No |
ClinGen gnomAD |
|
|
rs72553868 CA3515050 |
124 | S>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1356724715 CA361785742 |
124 | S>I | No |
ClinGen TOPMed |
|
|
rs1356724715 CA361785744 |
124 | S>N | No |
ClinGen TOPMed |
|
|
rs72553868 CA129176992 |
124 | S>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA129176999 rs910643430 |
125 | M>I | No |
ClinGen Ensembl |
|
|
rs998415796 CA129177006 |
126 | N>H | No |
ClinGen TOPMed |
|
|
rs774097437 CA3515051 |
126 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA361785782 rs1479241391 |
127 | H>R | No |
ClinGen gnomAD |
|
|
rs1288606899 CA361785778 |
127 | H>Y | No |
ClinGen TOPMed |
|
|
rs1403723829 CA361785810 |
129 | M>I | No |
ClinGen TOPMed |
|
|
CA361785814 rs1176193689 |
130 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
rs944754177 CA129177013 |
132 | K>E | No |
ClinGen gnomAD |
|
|
CA129177015 rs1020311575 |
133 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1384852901 CA361785839 COSM1567828 |
134 | A>T | large_intestine [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
CA3515053 rs771760057 |
137 | M>V | No |
ClinGen ExAC gnomAD |
|
|
CA361785872 rs1343923577 |
138 | G>V | No |
ClinGen gnomAD |
|
|
CA361785880 rs1282432028 |
139 | K>M | No |
ClinGen gnomAD |
|
|
rs1223081022 CA361785875 |
139 | K>Q | No |
ClinGen gnomAD |
|
|
rs1018634990 CA129177043 |
142 | Y>C | No |
ClinGen Ensembl |
|
|
rs1329529820 CA361785908 |
143 | I>V | No |
ClinGen gnomAD |
|
|
rs1217660445 CA361785915 |
144 | V>F | No |
ClinGen gnomAD |
|
| TCGA novel | 145 | W>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA129177047 rs945552191 |
147 | K>T | No |
ClinGen Ensembl |
|
|
rs1270349242 CA361785959 |
150 | M>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1270349242 CA361785958 |
150 | M>T | No |
ClinGen TOPMed gnomAD |
|
|
CA361785965 rs1489736190 |
151 | D>Y | No |
ClinGen gnomAD |
|
|
CA129177063 rs539375226 |
152 | L>P | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs1247174191 CA361785993 |
155 | G>D | No |
ClinGen TOPMed |
|
|
CA361785997 rs371234734 |
156 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA129177067 rs371234734 |
156 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA129177073 rs373476641 |
157 | L>F | No |
ClinGen gnomAD |
|
|
rs1222550972 CA361786005 |
157 | L>R | No |
ClinGen TOPMed |
|
|
CA361786002 rs373476641 |
157 | L>V | No |
ClinGen gnomAD |
|
|
rs1225361140 CA361786008 |
158 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA3515056 rs763772711 |
159 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1363769169 CA361786026 |
161 | Q>E | No |
ClinGen gnomAD |
|
|
rs1234599021 CA361786031 |
161 | Q>H | No |
ClinGen TOPMed |
|
|
CA361786036 rs1458848593 |
162 | L>P | No |
ClinGen gnomAD |
|
|
CA361786042 rs1295386241 |
163 | L>P | No |
ClinGen gnomAD |
|
|
CA129177074 rs935668004 |
164 | Q>E | No |
ClinGen TOPMed |
|
|
rs758335779 CA3515057 |
173 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA361786109 rs1352556442 |
173 | L>H | No |
ClinGen gnomAD |
|
|
rs1304567948 CA361786125 |
175 | K>M | No |
ClinGen gnomAD |
|
|
CA3515060 rs764743745 |
177 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA3515058 rs777611759 |
177 | R>W | No |
ClinGen ExAC TOPMed |
|
|
CA361786148 rs1356574835 |
179 | C>Y | No |
ClinGen gnomAD |
|
|
CA361786165 rs1221079969 |
181 | Y>C | No |
ClinGen gnomAD |
1 associated diseases with A1A4Y4
[MIM: 612278]: Inflammatory bowel disease 19 (IBD19)
A chronic, relapsing inflammation of the gastrointestinal tract with a complex etiology. It is subdivided into Crohn disease and ulcerative colitis phenotypes. Crohn disease may affect any part of the gastrointestinal tract from the mouth to the anus, but most frequently it involves the terminal ileum and colon. Bowel inflammation is transmural and discontinuous; it may contain granulomas or be associated with intestinal or perianal fistulas. In contrast, in ulcerative colitis, the inflammation is continuous and limited to rectal and colonic mucosal layers; fistulas and granulomas are not observed. Both diseases include extraintestinal inflammation of the skin, eyes, or joints. {ECO:0000269|PubMed:17554261, ECO:0000269|PubMed:19174780, ECO:0000269|PubMed:21278745}. Note=Disease susceptibility is associated with variants affecting the gene represented in this entry.
Without disease ID
- A chronic, relapsing inflammation of the gastrointestinal tract with a complex etiology. It is subdivided into Crohn disease and ulcerative colitis phenotypes. Crohn disease may affect any part of the gastrointestinal tract from the mouth to the anus, but most frequently it involves the terminal ileum and colon. Bowel inflammation is transmural and discontinuous; it may contain granulomas or be associated with intestinal or perianal fistulas. In contrast, in ulcerative colitis, the inflammation is continuous and limited to rectal and colonic mucosal layers; fistulas and granulomas are not observed. Both diseases include extraintestinal inflammation of the skin, eyes, or joints. {ECO:0000269|PubMed:17554261, ECO:0000269|PubMed:19174780, ECO:0000269|PubMed:21278745}. Note=Disease susceptibility is associated with variants affecting the gene represented in this entry.
1 regional properties for A1A4Y4
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | IRG-type guanine nucleotide-binding (G) domain | 32 - 181 | IPR030385 |
Functions
9 GO annotations of cellular component
| Name | Definition |
|---|---|
| autophagosome membrane | The lipid bilayer surrounding an autophagosome, a double-membrane-bounded vesicle in which endogenous cellular material is sequestered. |
| cell projection | A prolongation or process extending from a cell, e.g. a flagellum or axon. |
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| endoplasmic reticulum membrane | The lipid bilayer surrounding the endoplasmic reticulum. |
| Golgi apparatus | A membrane-bound cytoplasmic organelle of the endomembrane system that further processes the core oligosaccharides (e.g. N-glycans) added to proteins in the endoplasmic reticulum and packages them into membrane-bound vesicles. The Golgi apparatus operates at the intersection of the secretory, lysosomal, and endocytic pathways. |
| Golgi membrane | The lipid bilayer surrounding any of the compartments of the Golgi apparatus. |
| mitochondrion | A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration. |
| phagocytic cup | An invagination of the cell membrane formed by an actin dependent process during phagocytosis. Following internalization it is converted into a phagosome. |
| phagocytic vesicle membrane | The lipid bilayer surrounding a phagocytic vesicle. |
6 GO annotations of molecular function
| Name | Definition |
|---|---|
| BH3 domain binding | Binding to a BH3 protein domain, present in Bcl-2 family members. The BH3 domain is a potent death domain and has an important role in protein-protein interactions and in cell death. |
| CARD domain binding | Binding to a CARD (N-terminal caspase recruitment) domain, a protein-protein interaction domain that belongs to the death domain-fold superfamily. These protein molecule families are similar in structure with each consisting of six or seven anti-parallel alpha-helices that form highly specific homophilic interactions between signaling partners. CARD exists in the N-terminal prodomains of several caspases and in apoptosis-regulatory proteins and mediates the assembly of CARD-containing proteins that participate in activation or suppression of CARD carrying members of the caspase family. |
| GTP binding | Binding to GTP, guanosine triphosphate. |
| GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + H+ + phosphate. |
| protein kinase binding | Binding to a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate. |
| protein serine/threonine kinase activator activity | Binds to and increases the activity of a protein serine/threonine kinase. |
23 GO annotations of biological process
| Name | Definition |
|---|---|
| autophagosome assembly | The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm. |
| CAMKK-AMPK signaling cascade | The series of molecular signals in which calmodulin-dependent protein kinase activity enabled by a CAMKK directly activates an AMPK. The cascade begins with calmodulin binding calcium which in turn binds CAMKK enabling its calmodulin-dependent protein kinase activity. The cascade ends with AMP-activated protein kinase activity. |
| cellular response to interferon-beta | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-beta stimulus. Interferon-beta is a type I interferon. |
| cellular response to lipopolysaccharide | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria. |
| cellular response to virus | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus. |
| defense response | Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack. |
| defense response to bacterium | Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism. |
| defense response to Gram-negative bacterium | Reactions triggered in response to the presence of a Gram-negative bacterium that act to protect the cell or organism. |
| inflammatory response | The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages. |
| innate immune response | Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens. |
| nucleotide-binding oligomerization domain containing 2 signaling pathway | The series of molecular signals initiated by the binding of a ligand (such as a bacterial peptidoglycan) to a cytoplasmic nucleotide-binding oligomerization domain containing 2 (NOD2) protein receptor, and ending with regulation of a downstream cellular process. |
| positive regulation of autophagosome maturation | Any process that activates or increases the frequency, rate or extent of autophagosome maturation. |
| positive regulation of autophagy | Any process that activates, maintains or increases the rate of autophagy. Autophagy is the process in which cells digest parts of their own cytoplasm. |
| positive regulation of interferon-gamma-mediated signaling pathway | Any process that increases the rate, frequency or extent of an interferon-gamma-mediated signaling pathway. |
| positive regulation of peptidyl-serine phosphorylation | Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-serine. |
| positive regulation of peptidyl-threonine phosphorylation | Any process that increases the frequency, rate or extent of peptidyl-threonine phosphorylation. Peptidyl-threonine phosphorylation is the phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine. |
| positive regulation of protein phosphorylation | Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein. |
| positive regulation of protein serine/threonine kinase activity | Any process that increases the rate, frequency, or extent of protein serine/threonine kinase activity. |
| protein destabilization | Any process that decreases the stability of a protein, making it more vulnerable to degradative processes or aggregation. |
| protein lipidation involved in autophagosome assembly | The protein lipidation process by which phosphatidylethanolamine is conjugated to a protein of the ATG8 family, leading to membrane insertion of the protein as a step in autophagosome assembly. |
| protein stabilization | Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation. |
| regulation of protein complex stability | Any process that affects the structure and integrity of a protein complex by altering the likelihood of its assembly or disassembly. |
| regulation of protein-containing complex assembly | Any process that modulates the frequency, rate or extent of protein complex assembly. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MEAMNVEKAS | ADGNLPEVIS | NIKETLKIVS | RTPVNITMAG | DSGNGMSTFI | SALRNTGHEG |
| 70 | 80 | 90 | 100 | 110 | 120 |
| KASPPTELVK | ATQRCASYFS | SHFSNVVLWD | LPGTGSATTT | LENYLMEMQF | NRYDFIMVAS |
| 130 | 140 | 150 | 160 | 170 | 180 |
| AQFSMNHVML | AKTAEDMGKK | FYIVWTKLDM | DLSTGALPEV | QLLQIRENVL | ENLQKERVCE |
| Y |