A0T0V5

PR
Gene name
rbcR-B (ycf30-B)
Protein name
Probable RuBisCO transcriptional regulator
Names
Species
Thalassiosira pseudonana (Marine diatom) (Cyclotella nana)
KEGG Pathway
EC number
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

155-224 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for A0T0V5

Entry ID Method Resolution Chain Position Source
AF-A0T0V5-F1 Predicted AlphaFoldDB

No variants for A0T0V5

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for A0T0V5

No associated diseases with A0T0V5

2 regional properties for A0T0V5

Type Name Position InterPro Accession
domain Transcription regulator HTH, LysR 5 - 65 IPR000847
domain LysR, substrate-binding 91 - 299 IPR005119

Functions

Description
EC Number
Subcellular Localization
  • Plastid, chloroplast
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

1 GO annotations of cellular component

Name Definition
chloroplast A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.

2 GO annotations of molecular function

Name Definition
DNA-binding transcription factor activity A transcription regulator activity that modulates transcription of gene sets via selective and non-covalent binding to a specific double-stranded genomic DNA sequence (sometimes referred to as a motif) within a cis-regulatory region. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
transcription cis-regulatory region binding Binding to a specific sequence of DNA that is part of a regulatory region that controls transcription of that section of the DNA. The transcribed region might be described as a gene, cistron, or operon.

1 GO annotations of biological process

Name Definition
regulation of DNA-templated transcription Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MVLPFTLQQL RIFKAIASEK SFTQAAEILF VSQPSLSKQI KTLENRLGIL LLNRTGNKIL
70 80 90 100 110 120
LTEAGVVFLQ YSERILALCE ESCRALNDLK DGERGNLKVG ASQTIGAYLM PRVLTLFAQS
130 140 150 160 170 180
YPQINLHIDI DSTRIIAKKV ADRSLDIAVV GGDIPTGLKK NLEIEDFVED ELILIISKSH
190 200 210 220 230 240
PFAKKKKKKI SKEDLYHLNF ITLNSNSTIH KFINNILIQN NIQTAQFNVI MELNSIEAIK
250 260 270 280 290 300
TAVSLGLGAA FVSSSAIEKE LELKTVEIIT IENIRITRTL SIITNPDSHR SKAFDFFYNE
LWLLKNL